Next-masigpro: Dealing with RNA-seq time series

Ana Conesa, María José Nueda

Abstract


Recent advances in sequencing technologies have created alternatives to microarrays. These new type of data require an appropriate statistical treatment to get good results. New methods are needed but it is also important the study of the adequateness of the existing methods and the adaptation of them to the new type of data. maSigPro is a method to deal with time course microarray data that has been applied in several biological scenarios. In this work, we adapt maSigPro to RNA-seq time series analysis.


Keywords


next generation sequencing; time series analysis

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DOI: http://dx.doi.org/10.14806/ej.19.A.672

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