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Issue Title
 
Vol 17, No 1: Next Generation Sequencing Data Analysis Command line analysis of ChIP-seq results Abstract  HTML  PDF
Endre Barta
 
Vol 19: Supplement A Interplay between DNA sequence motifs and the human epigenome Abstract  PDF
John William Whitaker, Zhao Chen, Wei Wang
 
Vol 21 CexoR: an R/Bioconductor package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates Abstract  HTML  PDF
Pedro Madrigal
 
Vol 19: Supplement A Shape matters: differential peak detection for Chip-seq data sets Abstract  PDF
Gabriele Schweikert, Guido Sanguinetti
 
Vol 19: Supplement A DGW: an exploratory data analysis tool for clustering and visualisation of epigenomic marks Abstract  PDF
Saulius Lukauskas, Gabriele Schweikert, Guido Sanguinetti
 
Vol 19: Supplement A RSAT peak-motifs: Efficient prediction of transcription factor motifs and binding sites from genome-wide sequencing peak sets Abstract  PDF
Morgane Thomas-Chollier, Matthieu Defrance, Olivier Sand, Carl Herrman, Denis Thieffry, van Helden Jacques
 
Vol 17: Supplement B RSAT peak-motifs: fast extraction of transcription factor binding motifs from full-size ChIP-seq datasets Abstract  PDF
Morgane Thomas-Chollier, Matthieu Defrance, Olivier Sand, Carl Herrmann, Denis Thieffry, Jacques van Helden
 
Vol 17: Supplement B Bioinformatics developments for NGS data analysis at PRABI Abstract  PDF
Franck Picard, Guy Perrière
 
Vol 17: Supplement B Statistical approaches for the analysis of RNA-Seq and ChIP-seq data and their integration Abstract  PDF
Claudia Angelini, Italia De Feis
 
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ISSN: 2226-6089