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Vol 28 |
qualign: solving sequence alignment based on quadratic unconstrained binary optimisation |
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Yuki Matsumoto, Shota Nakamura |
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Vol 26 |
Ten Simples Rules on How to Organise a Bioinformatics Hackathon |
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Susanne Hollmann, Babette Regierer, Teresa k Attwood, Andreas Gisel, Jacques Van Helden, Gregoire Rossier, Paul J Kersey, Eija Korpelainen, Gert Vriend, Erik Bongcam-Rudloff |
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Vol 26: Special issue to Biostatistics and Mathematical Modelling in Bioinformatics |
The Network Analysis Profiler (NAP v2.0): a web tool for visual topological comparison between multiple networks |
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Mikaela Koutrouli, Theodosios Theodosiou, Ioannis Iliopoulos, Georgios A. Pavlopoulos |
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Vol 26 |
KEGG2Net: Deducing gene interaction networks and acyclic graphs from KEGG pathways |
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Sree K Chanumolu, Mustafa Albahrani, Handan Can, Hasan H Otu |
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Vol 24 |
PyFuncover: full proteome search for a specific function using BLAST and PFAM |
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Yoan Bouzin, Benjamin Thomas Viart, María Moriel-Carretero, Sofia Kossida |
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Vol 24 |
Report on the “Advanced Big Data Training School for Life Sciences”, Barcelona 3th-7th September 2018 |
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Yen Hoang, Juliane Pfeil, Maja Zagorščak, Axel Y. A. Thieffry, Eftim Zdravevski, Živa Ramšak, Petre Lameski, Sabrina K. Schulze, Eleni Papakonstantinou, Louis Papageorgiou, Tarry Singh, Ariel Duarte-López, Marta Pérez-Casany |
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Vol 23 |
Mobile microscopy for the examination of blood samples |
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Juliane Pfeil, Marcus Frohme, Katja Schulze |
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Vol 23 |
Establishment of “The South African Bioinformatics Student Council” and Activity Highlights |
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Candice Nancy Rafael, Jon Ambler, Antoinette Niehaus, James Ross, Ozlem Tastan Bishop |
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Vol 23 |
Galaksio, a user friendly workflow-centric front end for Galaxy |
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Tomas Klingström, Rafael Hernández-de-Diego, Théo Collard, Erik Bongcam-Rudloff |
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Vol 23 |
InSyBio ncRNASeq: A web tool for analyzing non-coding RNAs |
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Aigli Korfiati, Konstantinos Theofilatos, Christos Alexakos, Seferina Mavroudi |
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Vol 23 |
PolarFCS: A Multi-Parametric Data Visualisation Aid for Flow Cytometry Assessment |
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Pavandeep Gill, Joanne Luider, Etienne Mahe |
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Vol 22 |
Set up your own bioinformatics server: Chipster in EGI Federated Cloud |
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Kimmo Mattila, Diego Scardaci, Marica Antonacci, Catalin Condurache |
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Vol 21 |
Renewing bioinformatics workflow systems by using a Web 2.0 approach |
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Roberto Colella, Bachir Balech, Antonella Vaccina, Pietro Leo, Gaetano Scioscia |
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Vol 21 |
CexoR: an R/Bioconductor package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates |
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Pedro Madrigal |
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Vol 20 |
Large scale statistical analysis of genome data with Ruby and R: skipping interface libraries |
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Sergio RP Line, Ana P de Souza, Luciana S Mofatto |
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Vol 20 |
Fq_delta - Efficient storage of processed versions of fastq files |
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Andra Veraart, Henk-Jan van den Ham, Maarten A. Bijl, Arno C. Andeweg, Anita C. Schürch |
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Vol 19, No 1 |
Quick Direct-method Controlled (QDC): a simulator of metabolic experiments |
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Davide Cangelosi, Salvatore Fabbiano, Claudio Felicioli, Luca Freschi, Roberto Marangoni |
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Vol 18, No 1 |
Gigsaw – physical simulation of next generation sequencing for education and outreach |
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David Michael Alan Martin |
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Vol 18, No 1 |
Minimum Information About a Peptide Array Experiment (MIAPepAE) |
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Gordon Botha, Judit Kumuthini |
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Vol 18, No 1 |
Using ARC based grids for NGS read mapping - Grid interface for BWA |
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Kimmo Mattila |
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Vol 17, No 1: Next Generation Sequencing Data Analysis |
The future of HOPE: what can and cannot be predicted about the molecular effects of a disease causing point mutation in a protein? |
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Francesca Camilli, Annika Borrmann, Shima Gholizadeh, Tim AH te Beek, Remko KP Kuipers, Hanka Venselaar |
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Vol 17, No 1: Next Generation Sequencing Data Analysis |
GRID distribution supports clustering validation of large mixed microarray data sets |
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Angelica Tulipano, Carmela Marangi, Leonardo Angelini, Giacinto Donvito, Guido Cuscela, Giorgio Pietro Maggi, Andreas Gisel |
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Vol 17, No 1: Next Generation Sequencing Data Analysis |
Command line analysis of ChIP-seq results |
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Endre Barta |
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Vol 17, No 1: Next Generation Sequencing Data Analysis |
Cutadapt removes adapter sequences from high-throughput sequencing reads |
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Marcel Martin |
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Vol 16, No 1 |
Efficient functional bioinformatics tools: towards understanding biological processes |
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Alberto Pascual-Montano, Jose M Carazo |
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