PACMAN: PacBio Methylation Analyzer

Laurent Falquet, Alexis Loetscher

Abstract


We developed a tool written in Perl and an associated web site called PACMAN (PacBio Methylation Analyzer) allowing users to easily create images with Circos in a user-friendly interface. From the genome in FASTA format and the motifs in GFF format, PACMAN generates a publication quality image of the selected methylated motifs counts, locations and non-methylated locations, on one or both strands of the DNA. PACMAN is available at: http://www.unifr.ch/bugfri/pacman


Full Text:

Poster HTML PDF


DOI: https://doi.org/10.14806/ej.21.A.807

Refbacks

  • There are currently no refbacks.