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• Whole genome sequencing, assembly and annotation of Halomonas smyrnensis, a levan producing halophilic bacterium

  E Sogutcu, Z Emrence, M Arikan, A Cakiris, N Abaci, E Toksoy Oner, D Ustek, KY Arga

  p. 89

  2012-04-29

• A bioinformatics framework for the identification of active regulatory elements through the integrative analysis of high-throughput genomic data

  G Malagoli Tagliazucchi, A Miccio, A Cavazza, V Poletti, C Peano, G De Bellis, F Mavillo, S Bicciato

  pp. 45-46

  2012-04-29

• Topological analysis of co-expression networks in neoplastic tissues

  R Anglani, TM Creanza, VC Liuzzi, PF Stifanelli, R Maglietta, A Piepoli, S Mukherjee, FP Schena, N Ancona

  p. 127

  2012-04-29

• Devising and experimenting correlation-based metrics for evaluating the effectiveness of input encoding techniques in prediction tasks

  G Armano, E Tamponi

  p. 64

  2012-04-29

• Analysis workflow for the identification allelic variants associated with rare disorders using whole genome sequencing approach

  V Maselli, D Cittaro, E Stupka

  p. 102

  2012-04-29

• SARMA: a web resource for species assignment of high-throughput sequencing reads from metagenomics analysis

  M D'Antonio, D Paoletti, M Santamaria, T Castrignanò, G Pesole

  p. 52

  2012-04-29

• Core algorithms to search in biological structured data

  V Bonnici, R Giugno, A Pulvirenti, D Shasha, A Ferro

  pp. 65-66

  2012-04-29

• Identification and analysis of conserved pockets on protein surfaces

  M Cammisa, A Correra, T Fioriello, G Andreotti, MV Cubellis

  p. 108

  2012-04-29

• Cyto-Sevis: semantic similarity-based visualisation of protein interaction networks

  PH Guzzi, M Cannataro

  pp. 32-33

  2012-04-29

• NumtS footsteps from the past: an interbreed between eukaryotic nucleus and the mitochondrion

  FM Calabrese, DL Balacco, D Simone, M Attimonelli

  p. 82

  2012-04-29

• Statistical inference in high dimensional spaces of genomics: an RNA structural example

  Charles E. Lawrence

  p. 15

  2012-04-29

• miRNA-mRNA integrated pathway analysis: an application to colorectal cancer

  TM Creanza, R Maglietta, VC Liuzzi, R Anglani, PF Stifanelli, A Piepoli, S Mukherjee, FP Schena, N Ancona

  p. 129

  2012-04-29

• Digging in the RNA-seq garbage: evaluating the characteristics of unmapped RNA-seq reads in normal tissues

  M Carrara, R Calogero

  p. 34

  2012-04-29

• An accurate pipeline for analysis of NGS data of small non-coding RNA

  G Giurato, MR De Filippo, C Cantarella, G Nassa, M Ravo, E Nola, A Weisz

  pp. 100-101

  2012-04-29

• The role of transposable elements in shaping the combinatorial interaction of transcription factors

  A Testori, L Caizzi, S Cutrupi, O Friard, M De Bortoli, D Corà, M Caselle

  p. 38

  2012-04-29

• Renato Dulbecco: genes, cancer and epigenomics

  Ileana Zucchi

  p. 13

  2012-04-29

• Use of BioBlender for all atom morphing of protein structures

  MF Zini, Y Porozov, T Loni, R Andrei, M Zoppè

  p. 124

  2012-04-29

• Application of computational methods for structural and functional characterization of mutants of GALT enzyme

  A Marabotti, A Facchiano, L Milanesi, M Tang, K Lai

  pp. 116-117

  2012-04-29

• A combined computational/experimental strategy to map phosphatases on growth pathways

  PF Gherardini, F Sacco, S Paoluzi, J Saez-Rodriguez, M Helmer-Citterich, A Ragnini-Wilson, L Castagnoli, G Cesareni

  pp. 28-29

  2012-04-29

• In silico prediction of virus-derived small interfering RNAs and their putative host messenger targets in Solanum lycopersicum infected by different potato virus Y isolates

  D Catalano, F Cillo, M Finetti-Sialer

  pp. 83-84

  2012-04-29

• On bioimage informatics and decoding genomes

  Eugene W. Myers

  p. 14

  2012-04-29

• mentha: the interactome browser

  A Calderone, G Cesareni

  p. 128

  2012-04-29

• Micro-Analyzer: a tool for automatic pre-processing of multiple Affymetrix arrays

  PH Guzzi, M Cannataro

  pp. 58-59

  2012-04-29

• A software pipeline for the discovery of variations in exome sequencing projects

  E Mattei, PF Gherardini, G Ausiello, M Helmer-Citterich

  pp. 103-104

  2012-04-29

• Alternative splicing as regulator of protein-protein interactions

  A Colantoni, F Ferrè, M Helmer-Citterich

  p. 35

  2012-04-29