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• RSAT peak-motifs: fast extraction of transcription factor binding motifs from full-size ChIP-seq datasets

  Morgane Thomas-Chollier, Matthieu Defrance, Olivier Sand, Carl Herrmann, Denis Thieffry, Jacques van Helden

  p. 20

  2012-02-28

• CexoR: an R/Bioconductor package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates

  Pedro Madrigal

  e837

  2015-07-30

• Bioinformatics developments for NGS data analysis at PRABI

  Franck Picard, Guy Perrière

  p. 12

  2012-02-28

• Shape matters: differential peak detection for Chip-seq data sets

  Gabriele Schweikert, Guido Sanguinetti

  pp. 86-87

  2013-04-08

• Command line analysis of ChIP-seq results

  Endre Barta

  pp. 13-17

  2011-05-12

• DGW: an exploratory data analysis tool for clustering and visualisation of epigenomic marks

  Saulius Lukauskas, Gabriele Schweikert, Guido Sanguinetti

  pp. 57-59

  2013-04-08

• RSAT peak-motifs: Efficient prediction of transcription factor motifs and binding sites from genome-wide sequencing peak sets

  Morgane Thomas-Chollier, Matthieu Defrance, Olivier Sand, Carl Herrman, Denis Thieffry, van Helden Jacques

  pp. 28-29

  2013-04-08

• Interplay between DNA sequence motifs and the human epigenome

  John William Whitaker, Zhao Chen, Wei Wang

  pp. 32-33

  2013-04-08

• Statistical approaches for the analysis of RNA-Seq and ChIP-seq data and their integration

  Claudia Angelini, Italia De Feis

  p. 42

  2012-02-28