Deep insights into Mecp2-driven transcriptional (de)regulation at embryonic developmental stage through RNA-Seq data analysis

Kumar Parijat Tripathi, Maurizio D'Esposito, Mario R Guarracino, Marcella Vacca

Abstract


Rett Syndrome (RTT, MIM 312750) is a progressive X-linked neurodevelopmental disorder due to mutation of the Mecp2 gene (encoding the transcription regulator methyl-CpG binding protein 2). To understand the biological mechanism behind transcriptional remodeling under the influence of Mecp2 knocking out, we need large-scale study of the transcriptional response of null cortical neurons before and after treatment with serotonin receptor stimulator.


Keywords


Mecp2; Tophat2; Cufflinks; QuickGO; DAVID; web-services; Python

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DOI: https://doi.org/10.14806/ej.21.A.816

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